Python API¶
Quick reference¶
Ribo Attributes¶
Essential Ribo class attributes
ribopy.ribo |
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ribopy.ribo.Ribo |
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ribopy.ribo.Ribo.experiments |
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ribopy.ribo.Ribo.minimum_length |
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ribopy.ribo.Ribo.maximum_length |
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ribopy.ribo.Ribo.metagene_radius |
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ribopy.ribo.Ribo.left_span |
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ribopy.ribo.Ribo.right_span |
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ribopy.ribo.Ribo.format_version |
Getter Functions¶
Methods for reading ribosome profiling data.
ribopy.ribo.Ribo.get_metagene |
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ribopy.ribo.Ribo.get_region_counts |
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ribopy.ribo.Ribo.get_coverage |
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ribopy.ribo.Ribo.get_rnaseq |
Plot Functions¶
Some essential plots for ribosome profiling analysis,
ribopy.ribo.Ribo.plot_metagene |
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ribopy.ribo.Ribo.plot_lengthdist |
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ribopy.ribo.Ribo.plot_region_counts |